Metagenomic Assembly Workshop
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In this metagenomics workshop we will learn how to:

- Quality trim reads with sickle
- Perform assemblies with velvet
- Map back reads to assemblies with bowtie2

The workshop has the following exercises:

.. toctree::
   :maxdepth: 2

   reqs
   qtrim
   assembly
   map

At least a basic knowledge of how to work with the command line is required
otherwise it will be very difficult to follow some of the examples. Have
fun!